Index

_

_bin_one_map_smm() (in module scan) _chunk_indices() (in module scan) _clean_temp_files() (experiment.Experiment method) _correct_beam_centre() (rsm_metadata.RSMMetadata method) _correct_img_axes() (image.Image method) _find_exc_broken_frames() (in module meta_analysis) _init_horizontal_pixel_offsets() (rsm_metadata.RSMMetadata method)

_init_relative_azimuth() (rsm_metadata.RSMMetadata method) _init_relative_polar() (rsm_metadata.RSMMetadata method) _init_solid_angles() (rsm_metadata.RSMMetadata method) _init_vertical_pixel_offsets() (rsm_metadata.RSMMetadata method) _match_start_stop_to_step() (in module experiment) _on_exit() (in module scan) _remove_file() (in module experiment) _sum_numpy_files() (in module experiment)

A

add_processing_step() (experiment.Experiment method) (image.Image method) (scan.Scan method) alphacritical configuration value

apply_corrections() (image.Image method) azimuthal_sector configuration value

B

beam_centre configuration value beam_centre_range_check() (rsm_metadata.RSMMetadata method)

bin_maps_with_indices_smm() (in module scan) binned_reciprocal_space_map_smm() (experiment.Experiment method) binning module

C

calc_path (diamond_utils.ProcessArgs attribute) calcanglim() (experiment.Experiment method) calcqlim() (experiment.Experiment method) check_beam_centre_rot() (rsm_metadata.RSMMetadata method) check_folder() (in module diamond_utils) check_folder_corruption() (in module diamond_utils) check_shared_memory() (in module scan) check_slurmfiles() (diamond_utils.ProcessArgs method) chunk() (in module scan) colour_text() (in module diamond_utils) configuration value alphacritical azimuthal_sector beam_centre detector_distance edfmaskfile experimental_hutch ivqbins local_data_path local_output_path map_per_image mask_1 mask_2 mask_regions min_intensity process_outputs pyfaiponi qmapbins radialrange radialstepval savedats savetiffs setup skipimages skipscans slithorratio slitvertratio specific_pixels use_thv using_dps

correct_counttime() (in module image) correct_transmission() (in module image) corrections module COUNT_ARRAY (in module scan) create_experiment() (in module diamond_utils) create_job_name() (diamond_utils.ProcessArgs method) create_jobfile() (diamond_utils.ProcessArgs method) create_jobscript() (diamond_utils.ProcessArgs method) create_process_config() (in module diamond_utils)

D

data (image.Image property) data_corruption_warning() (in module diamond_utils) debuglogging (diamond_utils.ProcessArgs attribute) detector_distance configuration value dev (diamond_utils.ProcessArgs attribute) diamond_utils module

do_edfmask() (in module image) do_mask_eiger() (in module image) do_mask_pixels() (in module image) do_mask_regions() (in module image) do_savedats() (in module experiment) do_savetiffs() (in module experiment)

E

edfmaskfile configuration value exp_path (diamond_utils.ProcessArgs attribute) experiment module

Experiment (class in experiment) experimental_hutch configuration value

F

finite_diff_grid() (in module binning) finite_diff_shape() (in module binning) fix_delta_q_geometry() (in module binning) fix_intensity_geometry() (in module binning)

FRAME (in module scan) from_i07() (in module io) (scan.Scan static method) from_i07_nxs() (experiment.Experiment class method) from_i10() (scan.Scan static method)

G

generate_mask() (image.Image method) get_coordchange_matrix() (in module image) get_corr_ints_kout() (in module corrections) get_detector_distance() (rsm_metadata.RSMMetadata method) get_detector_values() (image.Image method) get_good_paths() (in module diamond_utils) get_horizontal_pixel_distances() (rsm_metadata.RSMMetadata method) get_im_path() (in module diamond_utils)

get_limitcalc_vars() (experiment.Experiment method) get_norm_value() (in module image) get_pixel_index_offsets() (rsm_metadata.RSMMetadata method) get_run_function() (in module diamond_utils) get_step_from_filesize() (in module meta_analysis) get_vert_hor_values() (image.Image method) get_vertical_pixel_distances() (rsm_metadata.RSMMetadata method) get_volume_and_bounds() (in module diamond_utils)

H

histogram_xy() (in module experiment)

horizontal_pixel_offsets (rsm_metadata.RSMMetadata property)

I

image module Image (class in image) incident_wavelength (rsm_metadata.RSMMetadata property) init_process_pool() (in module scan)

initial_value_checks() (in module diamond_utils) INTENSITY_ARRAY (in module scan) io module ivqbins configuration value

K

k_incident_length (rsm_metadata.RSMMetadata property)

L

linear_bin_to_vtk() (in module writing) linear_polarisation() (in module corrections) load_curve_values() (experiment.Experiment method) load_dps_offsets() (experiment.Experiment method) load_image() (scan.Scan method) load_incident_angle() (experiment.Experiment method) local (diamond_utils.ProcessArgs attribute) local_data_path configuration value

local_output_path configuration value lock (in module scan) logger (in module experiment) (in module image) (in module scan) lorentz() (in module corrections)

M

make_float32() (in module corrections) make_mask_lists() (in module diamond_utils) make_new_hdf5() (in module diamond_utils) map_per_image configuration value mask_1 configuration value mask_2 configuration value mask_edf() (experiment.Experiment method) mask_pixels() (experiment.Experiment method) mask_regions configuration value mask_regions() (experiment.Experiment method) meta_analysis module

METADATA (in module scan) min_intensity configuration value module binning corrections diamond_utils experiment image io meta_analysis rsm_metadata scan writing

N

norm_kout_array() (in module image)

NUM_THREADS (in module scan)

O

out_path (diamond_utils.ProcessArgs attribute)

OUTPUT_FILE_NAME (in module scan)

P

parse_and_reduce() (diamond_utils.ProcessArgs method) parse_dcd_angles() (experiment.Experiment method) parse_scans() (diamond_utils.ProcessArgs method) parse_setup() (diamond_utils.ProcessArgs method) print_calc_lines() (diamond_utils.ProcessArgs method) print_exp_lines() (diamond_utils.ProcessArgs method)

process_outputs configuration value ProcessArgs (class in diamond_utils) processing_steps (scan.Scan property) pyfaiponi configuration value python_version (diamond_utils.ProcessArgs attribute)

Q

q_bounds() (experiment.Experiment method) (scan.Scan method) q_vector_array() (image.Image method)

q_vectors() (image.Image method) qmapbins configuration value

R

radialrange configuration value radialstepval configuration value relative_azimuth (rsm_metadata.RSMMetadata property) relative_polar (rsm_metadata.RSMMetadata property) reshape_to_original() (in module corrections) RSM_ARRAY (in module scan) rsm_init_worker() (in module scan)

rsm_metadata module RSMMetadata (class in rsm_metadata) run_cluster_job() (diamond_utils.ProcessArgs method) run_full_map_process() (in module diamond_utils) run_one_scan_process() (in module diamond_utils) run_process_list() (in module diamond_utils) run_scanlist_combined() (in module diamond_utils) run_scanlist_loop() (in module diamond_utils)

S

save_binoviewer_hdf5() (in module diamond_utils) savedats configuration value savetiffs configuration value scan module Scan (class in scan) scan_nums (diamond_utils.ProcessArgs attribute) scan_range (diamond_utils.ProcessArgs attribute) setup configuration value setup_dps() (in module diamond_utils) setup_processing() (in module diamond_utils) SHM_COUNT (in module scan) SHM_INTENSITY (in module scan)

SHM_RSM (in module scan) skip_i07_exc_broken_frames() (in module meta_analysis) skipimages configuration value skipscans configuration value slithorratio configuration value slitvertratio configuration value solid_angles (rsm_metadata.RSMMetadata property) specific_pixels configuration value standard_adjustments() (in module diamond_utils) start_loggers() (diamond_utils.ProcessArgs method) swap_beam_centre() (rsm_metadata.RSMMetadata method)

T

typecheckdict() (in module binning)

U

update_i07_nx() (rsm_metadata.RSMMetadata method) use_thv configuration value

using_dps configuration value

V

version_path (diamond_utils.ProcessArgs attribute)

vertical_pixel_offsets (rsm_metadata.RSMMetadata property)

W

weighted_bin_1d() (in module binning) weighted_bin_3d() (in module binning) write_im_to_tiff() (in module experiment)

write_qi_to_csv() (in module experiment) writing module